| Issue Date | Title | Author(s) |
| 2020 | Applying machine learning to ultrafast shape recognition in ligand-based virtual screening | Bonanno, Etienne; Ebejer, Jean Paul |
| 2016 | Are the physicochemical properties of antibacterial compounds really different from other drugs? | Ebejer, Jean Paul; Charlton, Michael H.; Finn, Paul W. |
| 2015 | The clinical bank of BBMRI.mt | Vella, Joanna; Grech, Laura; Scerri, Jeanesse; Scerri, Christian A.; Bezzina Wettinger, Stephanie; Camilleri, Graziella; Zammit, Esther; Grech, Godfrey; Soler, Doriette; Borg, Isabella; Camilleri-Podesta, Marie Therese; Abela, Mark; Ebejer, Jean Paul; Borg, Joseph N.; Galdies, Ruth; Cassar, Wilhelmina; Camilleri, Alexander; Farrugia, Rosienne; Pace, Nikolai Paul; Said Conti, Valerie; Vella, Norbert; Saliba, Christian; Said, Edith; Ellul, Bridget; Grima, David; Felice, Alex |
| 2015 | The clinical bank of BBMRI.mt | Vella, Joanna; Borg, Joseph J.; Grech, Laura; Galdies, Ruth; Scerri, Jeanesse; Cassar, Wilhelmina; Scerri, Christian A.; Camilleri, Alexander; Bezzina Wettinger, Stephanie; Farrugia, Rosienne; Camilleri, G.; Pace, N.P.; Zammit, E.; Said Conti, V.; Grech, Godfrey; Saliba, Christian; Soler, Doriette; Vella, Norbert R.; Borg, Isabella; Said, Edith; Camilleri Podesta, Marie Therese; Ellul, Bridget; Felice, T.; Grima, David; Ebejer, Jean Paul; Felice, Alex E. |
| 2014 | Crowdsourcing yields a new standard for kinks in protein helices | Wilman, Henry R.; Ebejer, Jean Paul; Shi, Jiye; Deane, Charlotte M.; Knapp, Bernhard |
| 2014 | Data driven approaches to improve the drug discovery process : a virtual screening quest in drug discovery | Ebejer, Jean Paul |
| 2019 | Dwarna : a blockchain solution for dynamic consent in biobanking | Mamo, Nicholas; Martin, Gillian M.; Desira, Maria; Ellul, Bridget; Ebejer, Jean Paul |
| 2013 | The emerging role of cloud computing in molecular modelling | Ebejer, Jean Paul; Fulle, Simone; Morris, Garrett M.; Finn, Paul W. |
| 2017 | Engineering adaptive user interfaces using monitoring-oriented programming | Buhagiar, Aaron John; Pace, Gordon J.; Ebejer, Jean Paul |
| 2023 | Exploring the crop epigenome : a comparison of DNA methylation profiling techniques | Agius, Dorita; Kapazoglou, Aliki; Avramidou, Evangelia; Baranek, Miroslav; Carneros, Elena; Caro, Elena; Castiglione, Stefano; Cicatelli, Angela; Radanovic, Aleksandra; Ebejer, Jean Paul; Gackowski, Daniel; Guarino, Francesco; Gulyas, Andrea; Hidvegi, Norbert; Hoenicka, Hans; Inacio, Vera; Johannes, Frank; Karalija, Erna; Lieberman-Lazarovich, Michal; Martinelli, Federico; Maury, Stephane; Mladenov, Velimir; Morais-Cecilio, Leonor; Pecinka, Ales; Tani, Eleni; Testillano, Pilar S.; Todorov, Dimitar; Valledor, Luis; Vassileva, Valya |
| 2014 | Fragment‐based modeling of membrane protein loops : successes, failures, and prospects for the future | Kelm, Sebastian; Vangone, Anna; Choi, Yoonjoo; Ebejer, Jean Paul; Shi, Jiye; Deane, Charlotte M. |
| 2012 | Freely available conformer generation methods: how good are they? | Ebejer, Jean Paul; Morris, Garrett M.; Deane, Charlotte M. |
| 2023 | Genome size estimation of three endemic plant taxa from Malta | Agius, Dorita; Čížková, Jana; Ebejer, Jean Paul; Fresta, Louis; Lanfranco, Sandro; Doležel, Jaroslav; Farrugia, Rosienne |
| 2018 | Hb F Malta 1 : a biomarker for the developmental control of globin gene switching | Camilleri, Alexander; Galdies, Ruth; Cassar, Wilhelmina; Grech, Laura; Ebejer, Jean Paul; Borg, Joseph J.; Scerri, Christian A.; Felice, Alex E. |
| 2024 | High population frequency of GNRHR p. Q106R in Malta : an evaluation of fertility and hormone profiles in heterozygotes | Axiak, Clayton John; Pleven, Adrian; Attard, Ritienne; Borg Carbott, Francesca; Ebejer, Jean Paul; Brincat, Ian; Cassar, Karen; Gruppetta, Mark; Vassallo, Josanne; Bezzina Wettinger, Stephanie; Farrugia, Rosienne |
| 2019 | Ligity : a non-superpositional, knowledge-based approach to virtual screening | Ebejer, Jean Paul; Finn, Paul W.; Wong, Wing Ki; Deane, Charlotte M.; Morris, Garrett M. |
| 2021 | LigityScore : convolutional neural network for binding-affinity predictions | Azzopardi, Joseph; Ebejer, Jean Paul |
| 2013 | Memoir : template-based structure prediction for membrane proteins | Ebejer, Jean Paul; Hill, Jamie R.; Kelm, Sebastian; Shi, Jiye; Deane, Charlotte M. |
| 2019 | N-layered feudal network in an RTS game environment | Bugeja, Benjamin; Ebejer, Jean Paul; Spina, Sandro |
| 2015 | Novel molecular classifiers of basal-type subset in breast cancer patients | Baldacchino, Shawn; Saliba, Christian; Ebejer, Jean Paul; DeGaetano, James; Scerri, Christian; Grech, Godfrey |
| 2022 | A novel population of activated cytotoxic T cells infiltrate pituitary neuroendocrine tumour subytpes | Mazzitelli, Oriana; Ebejer, Jean Paul; Pace, Nikolai Paul; Gruppetta, Mark; Vassallo, Josanne; Saliba, David |
| 2012 | Plasmodium subtilisin-like protease 1 (SUB1) : insights into the active-site structure, specificity and function of a pan-malaria drug target | Withers-Martinez, Chrislaine; Suarez, Catherine; Fulle, Simone; Kher, Samir; Penzo, Maria; Ebejer, Jean Paul; Koussis, Kostas; Hackett, Fiona; Jirgensons, Aigars; Finn, Paul; Blackman, Michael J. |
| 2022 | Possible role of circulating bone marrow mesenchymal progenitors in modulating inflammation and promoting wound repair | Grech, Laura; Ebejer, Jean Paul; Mazzitelli, Oriana; Borg, Joseph J.; Seria, Elisa; Schembri, Kevin |
| 2015 | Quinoxaline-based inhibitors of malarial protease PfSUB1 | Kher, S.S.; Penzo, M.; Fulle, S.; Ebejer, Jean Paul; Finn, Paul W.; Blackman, M.J.; Jirgensons, A. |
| 2022 | RNA profiling of human growth hormone-secreting and non-functioning pituitary adenomas reveals novel and differentially expressed immune related genes | Spiteri, Emma Jayne; Formosa, Robert; Ebejer, Jean Paul; Pace, Nikolai Paul; Gruppetta, Mark; Saliba, David; Vassallo, Josanne |
| 2016-12 | Role of protein structure in drug discovery | Bonetta, Rosalin; Ebejer, Jean Paul; Seychell, Brandon; Vella, Marita; Hunter, Therese; Hunter, Gary J. |
| 2017 | Runtime verification using Valour | Azzopardi, Shaun; Colombo, Christian; Ebejer, Jean Paul; Mallia, Edward; Pace, Gordon J. |
