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Issue DateTitleAuthor(s)
2020Multi-branch convolutional neural network for identification of small non-coding RNA genomic lociGeorgakilas, Georgios K.; Grioni, Andrea; Liakos, Konstantinos G.; Chalupova, Eliska; Plessas, Fotis C.; Alexiou, Panagiotis
2018Ribothrypsis, a novel process of canonical mRNA decay, mediates ribosome-phased mRNA endonucleolysisIbrahim, Fadia; Maragkakis, Manolis; Alexiou, Panagiotis; Mourelatos, Zissimos
2018cCLIP-seq : retrieval of chimeric reads from HITS-CLIP (CLIP-seq) librariesAlexiou, Panagiotis; Maragkakis, Manolis; Mourelatos, Zissimos; Vourekas, Anastassios
2017Kc167, a widely used Drosophila cell line, contains an active primary piRNA pathwayVrettos, Nicholas; Maragkakis, Manolis; Alexiou, Panagiotis; Mourelatos, Zissimos
2016Sequence-dependent but not sequence-specific piRNA adhesion traps mRNAs to the germ plasmVourekas, Anastassios; Alexiou, Panagiotis; Vrettos, Nicholas; Maragkakis, Manolis; Mourelatos, Zissimos
2015The RNA helicase MOV10L1 binds piRNA precursors to initiate piRNA processingVourekas, Anastassios; Zheng, Ke; Fu, Qi; Maragkakis, Manolis; Alexiou, Panagiotis; Ma, Jing; Pillai, Ramesh S.; Mourelatos, Zissimos; Wang, P. Jeremy
2016CLIPSeqTools — a novel bioinformatics CLIP-seq analysis suiteMaragkakis, Manolis; Alexiou, Panagiotis; Nakaya, Tadashi; Mourelatos, Zissimos
2013Mitochondrial protein BmPAPI modulates the length of mature piRNAsHonda, Shozo; Kirino, Yoriko; Maragkakis, Manolis; Alexiou, Panagiotis; Ohtaki, Akashi; Murali, Ramachandran; Mourelatos, Zissimos; Kirino, Yohei
2014A MicroRNA precursor surveillance system in quality control of MicroRNA synthesisLiu, Xuhang; Zheng, Qi; Vrettos, Nicholas; Maragkakis, Manolis; Alexiou, Panagiotis; Gregory, Brian D.; Mourelatos, Zissimos
2011DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease associationMaragkakis, Manolis; Vergoulis, Thanasis; Alexiou, Panagiotis; Reczko, Martin; Plomaritou, Kyriaki; Gousis, Mixail; Kourtis, Kornilios; Koziris, Nectarios; Dalamagas, Theodore; Hatzigeorgiou, Artemis G.